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More publishers now requiring ORCID iDs

March 4, 2016 - 2:15pm by Andy Hickner

In January 2016, ORCID announced that a number of publishers - eLife, PLOS, the Royal Society, IEEE, AGU, EMBO, and Science - plan to require submitting authors to register for and provide ORCID IDs.   In its own words, ORCID is an open, non-profit, community-driven effort to create and maintain a registry of unique researcher identifiers and a transparent method of linking research activities and outputs to these identifiers. ORCID is unique in its ability to reach across disciplines, research sectors and national boundaries. It is a hub that connects researchers and research through the embedding of ORCID identifiers in key workflows, such as research profile maintenance, manuscript submissions, grant applications, and patent applications.   ORCID provides two core functions: (1) a registry to obtain a unique identifier and manage a record of activities, and (2) APIs that support system-to-system communication and authentication. As ORCID puts it, Benefits for researchers, in addition to improved discoverability of their works, include single sign-on across journals and streamlined data entry.  The recent launch of Crossref’s auto-update functionality means that researchers can opt to have their ORCID record automatically updated when their papers are published, which in turn means that university and other systems can receive updates directly and reduce reporting burden on researchers. To learn more about the benefits of ORCID and how to get started, contact your departmental librarian. 

Cushing/Whitney Medical Library 75th Anniversary Kickoff

January 25, 2016 - 4:23pm by Andy Hickner

(by Janene Batten) Over the course of 2016, the Cushing/Whitney Medical Library will be celebrating 75 years since its founding.   The Medical Library’s anniversary kick-off event on Friday was a great success. Harvey Cushing himself made a special appearance. He was available for photographs with everyone, including these 3 students. Everyone enjoyed the cake, which featured the Library’s 75th logo.  The Library has also begun to collect audio snippets of people's recollections of the Library. We will soon begin to update the library's Facebook page with these stories. You are welcome to attend any of the variety of 75th Anniversary Events which are open to our patrons and friends. If you have a special memory, please share your story . And as the year progresses, come back and read the impact that the Library has had on others.

Contest Winners for "Discovering the Beauty of Science"

January 13, 2016 - 4:08pm by Andy Hickner

(by Rolando Garcia Milian and Terry Dagradi) Last summer we invited Yale biomedical researchers (undergrads, graduate students, postdocs, faculty, associate researchers, etc.) to share results from their work where they felt the images produced in search of science crossed over to art.  We thank all of you who submitted and appreciate your willingness to share with the community.  The images were reviewed by a committee including New Haven sculptor Gar Waterman, Sarah Fritchey (Curator / Gallery Director at Artspace New Haven), and Dr. Derek K. Toomre, Associate Professor of Cell Biology and Director of the YALE 'CINEMA’ Laboratory. Together, they selected many of the images currently on exhibit in the foyer of Cushing/Whitney Medical Library as well as the three 1st Honor awardees. The 1st Honor Awardees are: Marco Onorati, Department of Neurobiology Neurons in a Dish, 2015 Juror comments: “Neuron: Good rendition, dreamy quality”  “The fantastic crystalline structure in the center of this composition is very powerful. The sense of pull and energy is so forceful that it almost suggests a big bang moment.” (Click to view larger image) Neurons differentiated in a dish from stem cells.  Microphotograph, fluorescence.    Mustafa Khokha, Department of Pediatrics Frog Head, Year: 2015 Juror comments: “Great composition and detail.”  “Just a cool thing, whatever it is” (Click to view larger image) Xenopus laevis tadpole (frog). Brain (green) and Actin (red) and nuclei (blue) View from the back of the head over the Imaged with Leica Sp8 Confocal by Helen Rankin Xenopus Cold Spring Harbor Course.   Kate Henderson, Department of Pathology Stones Dreaming, 2013 Juror comment: “My favorite - love this one - fabulous color and pattern” (Click to view larger image) Abstract digital composition of microscopy endocrine images. Image description: I create environments from natural elements to give people a sense of place, describing emotional essence and energy that connects us to each other and everything around us. My images both describe and celebrate the intrinsically aesthetic structure of the natural world and the ever-present duality in all things. I invite the viewer to see and feel the world both within us and around us, experiencing the macro vs microelements common to all. Painting-with-cells is how I describe the cyto-Illusions series. I start by using microscope images of human cells and also images of abstraction “found” in nature. Through layering and manipulation techniques, I create an image that mirrors micro images on a macro level. On one level the images are a colorful abstraction that allow the viewer to freely explore and experience the image on their own. Many images are suggestive of a specific element such as water, but others are more environmentally placed. On another level the images are about the reality of nature; cells of disease, the growth structure of plants, and the patterns of light filtered through the leaves.   The Viewers’ Choice Award This was determined by all those who voted (404 votes total) on an exhibition album created on the Medical Library Facebook page. Laura Pappalardo – Department of Neurology Astrocytes display robust intracellular calcium response in model of astrogliosis, 2013 (Click to view larger image) Astrocytes, a non-neuronal type of cell in the brain and spinal cord, respond to central nervous system insult through the incompletely understood process of reactive astrogliosis, which is a hallmark in pathologies such as multiple sclerosis and spinal cord injury. While the ramifications of astrogliosis are debated, it is agreed that in its extreme forms, this process leads to the formation of a scar, which is long-lasting and can inhibit the regeneration of injured neurons. While the molecular drivers of astrogliosis are an area of active investigation, a clearer understanding is needed. Here, we show that after a scratch injury, there is a robust intracellular calcium response, which propagates through the syncytium of confluent astrocytes (red indicates high intracellular calcium). This calcium transient leads to downstream signaling that can regulate the astroglial response to injury. We are currently working to investigate the mechanisms behind this phenomenon, paying particular attention to voltage-gated sodium channels. Color scale represents the ratio of fluorescent signals induced by 340 and 380 nm excitation in cells loaded with Fura-2 AM. Scale bar, 50 ╡m. In collaboration with Stephen Waxman, Joel Black, Mark Estacion, and Omar Samad.

The Cushing/Whitney Medical Library celebrates 75 years

January 13, 2016 - 2:04pm by Andy Hickner

Join us as the Cushing/Whitney Medical Library celebrates 75 years of being YOUR library. We are planning a year long program of exciting events. Mark your calendar for these highlights and watch for additional events, exhibits and information. January 22, 2016, 3-5pm 75th Anniversary Kickoff Party April 6, 2016, 4pm Associates Lecture and Reception, Immune system in health and disease. Dr. Ruslan Medzhitov June 3, 2016, 3pm Special Presentation, Harvey Cushing and John Fulton: Two Icons of the Roaring Twenties Bonded by Medicine and Books.  Dr. Dennis D. Spencer and Dr. Gordon Shepherd October 5, 2016, 3-5pm 75th Anniversary Gala

What's a guide? And how can Yale library guides help me?

January 11, 2016 - 3:12pm by Andy Hickner

Librarians at Yale have developed numerous online guides for Yale users.  Here at Yale, our guides can provide a number of things, including: Research guidance for a particular Yale course; Instructions on how to research a subject; Documentation for a research tool or service; or Instructions on accessing and using collections or resources. You might find different guides of particular interest based on your role and field, for example: NIH Public Access Policy, for researchers who receive NIH funding and the staff who support them. Get started exploring our full list of guides in the field of medicine, or browse all Yale guides including on topics outside the health sciences. 

DatabasE of genomiC varIation and Phenotype in Humans using Ensembl Resources (DECIPHER)

January 6, 2016 - 1:41pm by Rolando Garcia-Milian

Many genetic variants are novel or rare which makes difficult their clinical interpretation. The DECIPHER Consortium was initiated in 2004 as a community of academic centers of Clinical Genetics who submit consented, anonymized  genotype  and  phenotype  data  from  patients  with  rare  genomic  disorders for sharing with other clinicians and researchers. The identification of patients sharing variants in a given locus with common phenotypic features leads to greater certainty in the clinical interpretation of these variants. As of January 6, 2015, there are 18 539 publicly available patient record, 51 496 phenotype observation in these patients, and 27 175 publicly available copy-number variants in this database. DECIPHER can be search by phenotype, by genomic position, band, gene, pathogenicity, variant consequence, etc. Results are presented as a table or can be visualized in a browser. This browser contains different tracks where variants can be visualized in the context of other data. Learn more on DECIPHER and how to use it to make sense of genetic variants at the workshop “Making Sense of Variation”.  You can also contact Rolando Garcia-Milian with questions on this or any other variation tool, References DECIPHER: Database of Chromosomal Imbalance and Phenotype in Humans using Ensembl Resources. Firth, H.V. et al (2009). Am.J.Hum.Genet 84, 524-533 (DOI: dx.doi.org/10/1016/j.ajhg.2009.03.010)

YSM theses now available through EliScholar

December 15, 2015 - 11:37am by Andy Hickner

(by Nathan Rupp and Melissa Grafe) Nearly 900 Yale School of Medicine theses are now available through Yale University’s online institutional repository known as EliScholar. These include “current” theses published in the last decade that have come out of embargo as well as several YSM alumni theses published as far back as 1952. These theses document the rich research done by Yale’s medical students, and can provide a starting point for current medical students embarking on their projects.  We’re also pleased to make this part of our collection more openly accessible to researchers in general, as the print theses are stored in locked stacks at the Medical Library.  Current YSM students can browse this collection for examples of what a YSM thesis looks like. For more information about accessing theses at the Medical Library, please see https://library.medicine.yale.edu/collections/thesis.

World AIDS Day: HIV/AIDS Information on the Web and at Yale Libraries

December 1, 2015 - 10:05am by Andy Hickner

Today, December 1, is World AIDS Day.  We’ve come a long way since the first cases of the disease emerged over 30 years ago, and today there is a wealth of information resources on HIV/AIDS. For more in-depth research, at Yale, we provide access to over 200 e-books on HIV/AIDS topics, plus thousands of additional titles available in print. NIAID offers detailed information on current research efforts.  PrEP (Pre-exposure prophylaxis):  Check out pages on PrEP at CDC and AIDS.gov.   For basic information, the layperson seeking to learn more should begin at HIVinfo. Other general web resources include:   HIV.gov UNAIDS Newly diagnosed with HIV?  Start with “Newly Diagnosed: What you need to know” at AIDS.gov. As always, for comprehensive help finding and navigating current knowledge on HIV/AIDS, contact your departmental librarian.  (Image credit: https://www.flickr.com/photos/usembassynewdelhi/5217132779)

Great American Smokeout: Key Info Resources

November 18, 2015 - 12:27pm by Andy Hickner

Thursday, November 19 is the American Cancer Society's annual "Great American Smokeout," encouraging smokers to quit, even if it's only for one day.  What better time than to round up a few key information resources on tobacco cessation? Smokers may find the American Cancer Society's website helpful, in particular its "Stay Away from Tobacco" section.  For help finding more evidence on tobacco and smoking cessation, you can always contact your department's librarian.   
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